| Alter Middle | 6 - 12 | 25 | 2.6 | 78216 |
| Alternative Center | 5 - 12 | 54 | 3.9 | 78237 |
| Alternative School | 7 - 11 | 34 | 4.9 | 78224 |
| Bexar Co J J A E P | PK - 12 | 0 | | 78208 |
| Bexar Co J J A E P | 7 - 11 | 11 | | 78214 |
| Bexar Co J J A E P | 8 - 9 | 2 | | 78224 |
| Bexar Co J J A E P | 7 - 11 | 12 | | 78208 |
| Bexar County Juvenile Justice Acad | 8 - 10 | 1 | | 78208 |
| Bexar County Lrn Ctr | 6 - 12 | 96 | 10.7 | 78223 |
| Career Plus Learning Academy | 6 - 12 | 92 | 21.4 | 78220 |
| Christus Santa Rosa | K - 12 | 10 | 10.0 | 78207 |
| Daep At Holmgreen | 6 - 11 | 12 | 4.1 | 78229 |
| Dietrich Road Community Center | PK - 12 | 0 | | 78218 |
| Eagle Academy Of San Antonio | 6 - 12 | 122 | 15.2 | 75067 |
| Edgewood Academy | 8 | 113 | 12.6 | 78237 |
| Fenley Transitional High School | 9 - 11 | 4 | 1.3 | 78211 |
| Garner Middle | 6 - 12 | 886 | 14.0 | 78209 |
| George Gervin Charter | PK - 12 | 260 | 14.5 | 78218 |
| Girls And Boys Town Shelter Of Sa | 3 - 12 | 18 | 18.0 | 78204 |
| Habilitation Program | K - 12 | 57 | 2.6 | 78229 |
| Harlandale Alternative Center Boot | 9 - 11 | 8 | 7.3 | 78221 |
| Harlandale Alternative Center Boot | 8 | 4 | 4.4 | 78214 |
| Healy Murphy Daep Discretionary | 9 | 1 | 0.8 | 78202 |
| Hernandez Learning Center | PK - 12 | 0 | | 78224 |
| Higgs Carter King Gifted & Talente | PK - 12 | 286 | 19.1 | 78218 |
| Holmgreen Center | K - 12 | 133 | 4.1 | 78229 |
| Homebound | PK - 12 | 42 | 5.2 | 78217 |
| Homebound | PK - 12 | 77 | 77.0 | 78238 |
| Jewel C Wietzel Center | 2 - 12 | 24 | 4.9 | 78221 |
| Jja | 5 - 12 | 15 | | 78208 |
| John H Wood Jr Charter School At H | 6 - 12 | 141 | 11.8 | 78230 |
| Jubilee Academic Center | PK - 12 | 329 | 11.3 | 78222 |
| Juvenile Detent Ctr | 6 - 12 | 201 | 18.3 | 78210 |
| Karen Wagner High School | 9 - 11 | 1,672 | 14.2 | 78244 |
| Krueger Middle | 6 - 12 | 1,110 | 12.9 | 78218 |
| Laurel Ridge | K - 12 | 90 | 11.2 | 78713 |
| Legacy Middle School | PK - 12 | 0 | | 78263 |
| Mead Es | PK - 12 | 0 | | 78238 |
| Murnin Es | PK - 12 | 0 | | 78238 |
| Nehemiah Institute | PK - 12 | 0 | | 78216 |
| New Elementary | PK - 12 | 0 | | 78263 |
| New M S | PK - 12 | 0 | | 78221 |
| Nisd Bexar County Jja | 7 - 11 | 29 | | 78238 |
| North East J J A E P | 6 - 12 | 83 | | 78217 |
| Off Campus P P C D | PK - 12 | 46 | 11.5 | 78229 |
| Omega Academic Center | 6 - 12 | 117 | 8.6 | 78222 |
| Pupil Personnel Campus | PK - 12 | 37 | 5.3 | 78238 |
| Radiance Academy Of Learning | PK - 12 | 141 | 10.1 | 78232 |
| Radiance Academy Of Learning (West | PK - 12 | 271 | 15.1 | 78227 |
| Robert C Zamora Middle | PK - 12 | 0 | | 78224 |
| Roy Maas Youth Alternatives/The Br | 5 - 12 | 23 | 23.0 | 78213 |
| S Presa El | PK - 12 | 0 | | 78210 |
| San Antonio School For Inquiry & C | K - 12 | 206 | 13.7 | 78212 |
| School Aged Parenting Program | PK - 12 | 37 | | 78238 |
| Shekinah Walzem | PK - 12 | 255 | 12.1 | 78218 |
| Southside Alter Ctr | 3 - 12 | 32 | 4.8 | 78221 |
| Stevens Hs | 9 - 11 | 1,987 | 18.8 | 78251 |
| Student Adjustment Ctr | 6 - 12 | 0 | 0.0 | 78263 |
| White Middle | 6 - 12 | 1,049 | 15.2 | 78218 |
| Yucca Gardens | PK - 12 | 0 | | 78218 |